Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDLSDFLNSGWESVLVVLGIVGVIINFLSKAGKGTEEENKKAPQPRPNLRSMHQASRTQTTKKPEKRKVSQGTFTQNKEQDKVIAEQKAAQQKMLREIRRESDVAKGKNIIKSTSSHQKKARKLRGRLQEAIITKEILDKPVSLRKNHL |
2RDD Chain:B ((16-21)) | ---------------------FYFMIL-------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2RDD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -647 for 15 contacts (-43.1/contact) +
2D Compatibility (PS) -570 + (NN) 939 + (LL) 9976
1D Compatibility (HY) -1600 + (ID) 0
Total energy: 8098.0 ( 539.87 by residue)
QMean score : -0.436
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