Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKDKTKKRKWNWAQILAIFVLVTLVVSMVYATVNLITAPSGNVPEGQQTKGDYSLMLMQCVLGVVVLFLPSIISKKMKFVIPNAMYIVFIVFLYCAIYLGEVRSFYYLIPNWDTILHTFSGAMLGGLGFSIVSLLNNDERITLSMSPVFVALFACSFAVFLGVFWEFYEFAADSFGMNMQKTMLEDGTMLQGHAAVADTMGDLFVDFLGAFVISIIGYFSIRKNKKWMKNFEFKKVDEEVK |
| 2L2T Chain:A ((54-61)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGVIGGL------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2L2T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -1350 for 22 contacts (-61.4/contact) +
2D Compatibility (PS) -755 + (NN) 887 + (LL) 19960
1D Compatibility (HY) -400 + (ID) 50
Total energy: 18292.0 ( 831.45 by residue)
QMean score : -0.340
|
|
|