Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQNDMYNNIRLSVIQLIDSKKENLKENNIKLTIIKNEKDGYVVELDNDKCMAEIVVEEPTYTPYRYISFEVVSLMDGKVKIIYSWYDDETSQWSDIEKELNKGIQFLNNFKTMEQ
3ES5 Chain:A ((98-160))
-------------IQLVDDDKENIATSIYGLSFFKAARQLYSTMLDHEK-----AVNQPLKAVY-YDETPIPAHMSGALGII---------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3ES5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 13144 for 321 contacts (40.9/contact) +
2D Compatibility (PS) -5966 + (NN) 1763 + (LL) 3848
1D Compatibility (HY) -4000 + (ID) 1050
Total energy: 7739.0 ( 24.11 by residue)
QMean score : -0.053
(partial model without unconserved sides chains):
PDB file :
Tito_3ES5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ES5-query.scw
PDB file :
Tito_Scwrl_3ES5.pdb
: