Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKITNNLFADIGFLFFILLCFITIGFMINTPDEYLRNIILLNITFLLVIITYFTNLTLGLILNVLYIFIYATYIIYEIVANQIAYGFGSYFWLIITPLFTVASAMFTRNTSRLQEENTKIKQQNLYLGTIDQETLLKNIVSFQNDERIFSSISRRYDLPLSLMVIKVRHWRELKRFQSEDEMRLALQDISAILETCIRTSDVLYLLDKDDATWGLLL-LTDEPGGKLVADRIKSRIAEANTEEFAAKYRVKLELRIGTSQFDSEKVKTPLDFIDLATKELEYDV |
3HVA Chain:A ((266-415)) | -------------------------------------------------------------------------------------------------------------------------------VSSQDPVTGLYNRSHFLDLMDAAVQQAVTARKPSTLAYIHLNGYPSLQADHGLSGIDLLLGQLAGLMREQFGEEADLARFGD--SIFAALFKGKTPEQAQAALQRLLKKVENHLFEL--NGRSAQATLSIGVAGLDE-KTAKAQDVMNRAHRCAD--- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3HVA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -71659 for 1151 contacts (-62.3/contact) +
2D Compatibility (PS) -15712 + (NN) -298 + (LL) 12772
1D Compatibility (HY) -400 + (ID) 1100
Total energy: -76397.0 ( -66.37 by residue)
QMean score : 0.500
|
|
|