Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | METNQILETIRMIEEEKLDIRTITMGISLLDCMDGDGEAARKKIYQKIVTKARNLVAVGEAIESEFGIPIINKRISVTPIAIIAGSSADTDYVEFAKTLDAAAKEVGVNFIGGYSALVQKGYTKGDEILIRSIPQALAQTERVCSSVNVGSTRTGINMDAVRQMGEVIKETADLTADTQGLGCAKLVVFANAVEDNPFMAGAFHGVGEADCVINVGVSGPGVVKRAIEKVKGEPFDIVAETVKQTAFKITRMGQLVGQVASEKLGVPFGIVDLSLAPTPAIGDSVAHILEEMGLEMVGTHGTTAALALLNDAVKKGGVMACGHVGGLSGAFIPVSEDAGMIEAVQQGALNLEKLEAMTAICSVGLDMIAVPGDTTAETLAAMIADEAAIGVINNKTTAVRVIPASGTKVGDMVEFGGLLGTAPVMPVNGKSSVDFIARGGRIPAPIHSFKN |
| 2HA9 Chain:A ((2-440)) | -DIRQVTETIAMIEEQNFDIRTITMGISLLDCIDPDINRAAEKIYQKITTKAANLVAVGDEIAAELGIPIVNKRVSVTPISLIGAATDATDYVVLAKALDKAAKEIGVDFIGGFSALVQKGYQKGDEILINSIPRALAETDKVCSSVNIGSTKSGINMTAVADMGRIIKETANLS----DMGVAKLVVFANAVEDNPFMA-AFHGVGEADVIINVGVSGPGVVKRALEKVRGQSFDVVAETVKKTAFKITRIGQLVGQMASERLGVEFGIVDLSLAPT----DSVARVLEEMGLETVGTHGTTAALALLNDQVKKGGVMACN--------------DEGMIAAVQNGSLNLEKLEAMTAICS---DMIAIPEDTPAETIAAMIADEAAIGVINMKTTAVRIIPKG--KEGDMIEF-----TAPVMKVNGASSVDFISRGGQIPAPI----- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2HA9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 17623 for 3410 contacts (5.2/contact) +
2D Compatibility (PS) -39622 + (NN) 11314 + (LL) 892
1D Compatibility (HY) 20800 + (ID) 1650
Total energy: 9357.0 ( 2.74 by residue)
QMean score : 0.107
|
|
|