Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNIVLIASLIFIAQTCLGFFQVKYYQHHMNKVANKYAGKIGYHLYSEMERLKFRTSAVAILVVNENHIVHECQILTGKTVFAQFKTFTNYHHKELSEILTELSSKNKNTIQEKAIIKTVNSCMKAL
2F3X Chain:A ((46-82))
----------------------------------------------EIIDLELDDQAISILEIKQEHVFSRNQIARGHHLFAQ-------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2F3X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9219 for 153 contacts (-60.3/contact) +
2D Compatibility (PS) -3717 + (NN) 1206 + (LL) 7712
1D Compatibility (HY) -3600 + (ID) 600
Total energy: -8218.0 ( -53.71 by residue)
QMean score : -0.135
(partial model without unconserved sides chains):
PDB file :
Tito_2F3X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2F3X-query.scw
PDB file :
Tito_Scwrl_2F3X.pdb
: