Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSNEYKFETIQVHGGHTPDGDTHSRAVPIYQTTSYTFDSPEHAAALFGLQETGNIYTRIMNPTTAVLEERLTLLEGGIGAVATASGMAAITYSILNIAGSGDHIVAAATLYGGTHTLFSHTFKTFGIDVTFVD-PNEPENFEKAIKDNTKAVFIETIGNPDINIVDIEKVAKIAHASDIPLIVDNTFATAYLNRPFDFGADIVVYSATKFIGGHGVAIGGAVIDSGKFNWANGKFPKLVVPDDSYNGLSYTNDVGAAAYITKLRVSLLRDTGAALSPFNAFLLILGLETLSLRLEQHVKNAKQVANFLNDHPKVAWVNYPGLKDNKYHELAQKYLPKGPGSIFTFGVKGGYEAGKKVIESVELFSHLANVGDAKSLIIHPASTTHQQLSEEQQLTAGVKPESIRLSIGIENADDIIQDLTKALEQI
4KAM Chain:A ((20-433))----WSFETKQIHAGQQPDS-----ALPIYQTTS--------------------------NPTTDVVEQRIAALEGGVAALFLSSGQAAETFAILNLAGAGDHIVSSPRLYGGTYNLFHYSLAKLGIEVSFVDDPDNLDSWQAAVRPNTKAFFGETISNPQIDLLDTPGVAEVAHRNGIPLIVDNTIATPYLIRPFTQGADIVVHSATKYLGGHGAAIAGVIVDGGTFDWTQGRFPEFTTPDPSYHGVVFA-ELGAPAYALKARVQLLRDLGSAASPFNAFLVAQGLETLSLRIERHVSNAQRVAEFLADREDVVTVNYAGLPGSPWHERAKKLSPKGTGAVLSFELAGGVEAGKAFVNALKLHSHVANIGDVRSLVIH---------------------GLVRLAVGIEGIEDILADL-------


General information:
TITO was launched using:
RESULT:

Template: 4KAM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -236290 for 3237 contacts (-73.0/contact) +
2D Compatibility (PS) -39652 + (NN) -26065 + (LL) 4164
1D Compatibility (HY) -34000 + (ID) 9850
Total energy: -341693.0 ( -105.56 by residue)
QMean score : 0.568

(partial model without unconserved sides chains):
PDB file : Tito_4KAM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4KAM-query.scw
PDB file : Tito_Scwrl_4KAM.pdb: