Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKRSWPDFAAFLLTILTVTWIILTWGLHISDIVPGGEKGIWYKLIPLFLG---IISTI--SVFFVKEKLVKWILLGFNILLLILIYFVYHIGEIGMF
1XQ1 Chain:A ((18-106))
-------------------------------LVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQV------------------
General information:
TITO was launched using:
RESULT:
Template:
1XQ1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24789 for 256 contacts (-96.8/contact) +
2D Compatibility (PS) -4887 + (NN) -4843 + (LL) 5184
1D Compatibility (HY) -2000 + (ID) 800
Total energy: -32135.0 ( -125.53 by residue)
QMean score : 0.254
(partial model without unconserved sides chains):
PDB file :
Tito_1XQ1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XQ1-query.scw
PDB file :
Tito_Scwrl_1XQ1.pdb
: