Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VANKFKTLDKMVYNLLLEKIKNGELVPNEHLAEEKLAREFGVSRSPLRKAIATLTAQGIVSYHENSGAVLNDCIVDADRYVQLMETIEIFVDAA------IAKAA--HFGYEMDLEKLYARMQEMERFSYLTDLENYFDAHHRFILCLISFAENPYQVRIVKQIFFQMVHFSDGINMFKSVEIREWTNKKSNQIYELLAEGKIELARKTIKSMFAELTIQAYR
3IHU Chain:A ((32-170))
----------------------GTFVPGQRLVETDLVAHFGVGRNSVREALQRLAAEGIVDLQRHRGAVI--------RRLSLQETLDVL-DVAERMTGLLARAATRGSGNQPQVQALRASVQALVAAEKAQDGETFSNARRHFYRTLLEMGDNRELRRLFPTIHMPIVH-----------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3IHU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -56194 for 786 contacts (-71.5/contact) +
2D Compatibility (PS) -14419 + (NN) -5421 + (LL) 7288
1D Compatibility (HY) -8000 + (ID) 2150
Total energy: -78896.0 ( -100.38 by residue)
QMean score : 0.404
(partial model without unconserved sides chains):
PDB file :
Tito_3IHU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IHU-query.scw
PDB file :
Tito_Scwrl_3IHU.pdb
: