Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKAKYEENFKKSLVALY--RRGKTKHSICQEFNVPHSTFGKWIKKFNNEENIE----SNEILNILQAQELKKQRVLLEEELSILTEAIAVFENPLPKNK
2JN6 Chain:A ((1-77))
MPTKTYSEEFKRDAVALYENSDGASLQQIANDLGINRVTLKNWIIKYGSNHNVQGTTPSAAVSEAEQIRQLKKENAL-----------------------
General information:
TITO was launched using:
RESULT:
Template:
2JN6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4841 for 377 contacts (-12.8/contact) +
2D Compatibility (PS) -7277 + (NN) -1566 + (LL) 1956
1D Compatibility (HY) -4400 + (ID) 1100
Total energy: -17228.0 ( -45.70 by residue)
QMean score : 0.531
(partial model without unconserved sides chains):
PDB file :
Tito_2JN6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JN6-query.scw
PDB file :
Tito_Scwrl_2JN6.pdb
: