Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKTELEKMIAGEMYDPSDRELAHGRNRARKFCREINDAMDSE--SRASVLKRLFGGTKENVYVEPDFRVDYGSNIYVGENFYANFDCVILDVCEVHIGDNCMMAPGVHIYTATHPLDPVERNSGLELGKPVEIGDNVWIGGRAIINPGVKLGNNVVVASGAVVTKSFPDNVVVAGNPARVIKTIEVEEK
2IC7 Chain:A ((1-185))
MKSEKEKMLAGHLYNPADLELVKERERARRLVRLYNETLETEYDKRTGLLKELFGSTGERLFIEPNFRCDYGYNIHVGENFFMNFDGVILDVCEVRIGDHCFIGPGVHIYTATHPLDPHERNSGLEYGKPVVIGHNVWIGGRAVINPGVTIGDNAVIASGAVVTKDVPANAVVGGNPAKVIKWLK----
General information:
TITO was launched using:
RESULT:
Template:
2IC7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -134586 for 1440 contacts (-93.5/contact) +
2D Compatibility (PS) -20687 + (NN) -13669 + (LL) 464
1D Compatibility (HY) -21600 + (ID) 5950
Total energy: -196028.0 ( -136.13 by residue)
QMean score : 0.635
(partial model without unconserved sides chains):
PDB file :
Tito_2IC7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2IC7-query.scw
PDB file :
Tito_Scwrl_2IC7.pdb
: