Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VAKRRKKPQEEHVDETWLIPYSDLLTLLLALFIVLFASSSVDAKKFEQMGNAFKKIVEEGAAGNQAYVSKEKGPDDPNVNAVLKAMEEQDKKKEANEQEKAKKAAAALLKKQNEEKIEAFKKQIDS-YIAAENLGTKMTTKYSDEGLLITIRDDILFQSGSAELSAGKREIAKEIGELFAQGKGTMEGIVSGHTDNVPISTSIYSSNWELSVARAVNFMEAIIQENSEV---NPGEFSARGYGEFRPVAKNDIAANREKNRRVEIMVRPINRDTLDEDE |
| 3WPW Chain:A ((20-166)) | ---------------------------------------------------------------------------------------------------------SQEMETLMESIKKALEREIEQGAIEVENLGQQIVIRMREKGA---------FPEGSAFLQPKFRPLVRQIAELVKDVPGIVR--VSGHTDNRPLDSELYRSNWDLSSQRAV----SVAQEMEKVRGFSHQRLRVRGMADTEPLLPNDSDDNRALNRRVEISI------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WPW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -3426 for 1075 contacts (-3.2/contact) +
2D Compatibility (PS) -15445 + (NN) -7398 + (LL) 9760
1D Compatibility (HY) -7600 + (ID) 2600
Total energy: -26709.0 ( -24.85 by residue)
QMean score : 0.432
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