Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGNWQQKWESWRDMTAAMQQEIKIEAAEKVTSYIKNDQFEEAINVIRQTENLLNELDFETKMNRVEEQLQAFTSDQEAAKSFEASQLQNIEKPSTKVSFDLSHVKSEAINQFTKRDFNLVDSNDTHMQFLKGNRNFYMDIFNPEESEEYHYANLDEKCQYKNIGFICQNDAAAEIATKLTNEWLETLEAPKKKFLTVNIANLNAMKQNPEVLFQ |
| 4GDN Chain:A ((145-201)) | -------------------------------------------------------------------------------------------------------------------------------------RAIMGDELHHKPGEEFEYSNMN----YDLLGLIIQNVTKQSYTKYITNSWLKPLHMTHTSF-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GDN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 1947 for 260 contacts (7.5/contact) +
2D Compatibility (PS) -5489 + (NN) -89 + (LL) 12648
1D Compatibility (HY) -6000 + (ID) 850
Total energy: 2167.0 ( 8.33 by residue)
QMean score : 0.126
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