Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPEKLDTVLGYLKEFPDYYKYVTKKTYTLNEKIIFEDEKAKSIFFIVEGYAAVELEDNLRKTNYISIFVLPYNVLGIDAFSSYPKKKHSITVMSESLMLYKIDADFLLNILSIKPDVNDFLLTSIADVFARHYALLGMIAKTPKERIYMALENLAVEMGTEDEERNEIVLPNFINQSVLARYCRTTQPNISNLLTELVEEEFLINKKSPYRIDKDSLDI
4RFA Chain:A ((10-225))--EKLDTVLGYLKEFPDYYKYVTKKTYTLNEKIIFEDEKAKSIFFIVEGYAAVELEDNLRKTNYISIFVLPYNVLGIDAFSSYP--KHSITVMSESLMLYKIDADFLLNILSIKPDVNDFLLTSIADVFARHYALLGMIAKTPKERIYMALENLAVEMGTEDEERNEIVLPNFINQSVLARYCRTTQPNISNLLTELVEEEFLINKKSPYRIDKDSLD-


General information:
TITO was launched using:
RESULT:

Template: 4RFA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -149791 for 1523 contacts (-98.4/contact) +
2D Compatibility (PS) -23083 + (NN) -7650 + (LL) 400
1D Compatibility (HY) -35600 + (ID) 10700
Total energy: -226424.0 ( -148.67 by residue)
QMean score : 0.506

(partial model without unconserved sides chains):
PDB file : Tito_4RFA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4RFA-query.scw
PDB file : Tito_Scwrl_4RFA.pdb: