Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFKNLFKKPKMKDEMLEMKQNQYGARAFNMMIIIVAIVILIKAVVLEASISELWVELLLLIVGGGYYFYSVLKNNVPFMPTISLKQTIRLVFLISAIFGISVGIRNVFFLYADNMSGTELSYQMMMFFFISLFTAIGSGVIFGALAYCLYQLSKWQEKNIMKKIEVENAED |
2YSR Chain:A ((49-73)) | ------------------------------------------------------------------WLYDLLRNNSNFGPEVTRQQTIQLL-------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YSR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -7932 for 121 contacts (-65.6/contact) +
2D Compatibility (PS) -2486 + (NN) 187 + (LL) 14328
1D Compatibility (HY) -2800 + (ID) 500
Total energy: 797.0 ( 6.59 by residue)
QMean score : 0.507
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