Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceVIYLDNEDVLDQAYNFAMEEYALRSLDENETYFMFYRMKPTIIVGKNQNTLEEINHPFVKDHHIDVLRRLSGGGAVYNDEGNISFSMITKDDGNSFQNFAKFTEPVIRALRKLGVNAELSGRNDIEVNGKKISGNAQFATKGRLYSHGTLLFDVDLSMLEKALQVDPEKYLSKGVKSVRSRVTTIREHLAEDIDILTFKQILLESIFETKDIP---RYTFTEADKQGIEKLRTERYRNWDWTYGKSPKATIKRKKRFPAGTIEFQVSLEKGQVKEATIYGDFFGTEDVAELAEKIIGCRFERKSIQNAWQEINAKDYFGGIEKEAILDMLFE
1VQZ Chain:A ((22-339))----------DTAFNIALEEYAFKHLLDEDQIFLLWINKPSIIVGRHQNTIEEINRDYVRENGIEVVRRISGGGAVYHDLNNLNYTIISKEDENKAFDFKSFSTPVINTLAQLGVKAEFTGRNDLEIDGKKFCGNAQAYINGRIMHHGCLLFDVDLSVLANALKVSKDKFESKGVKSVRARVTNIINELPKKITVEKFRDLLLE--YMKKEYPEMTEYVFSEEELAEINRIKDTKFGTWDWNYGKSPEFNVRRGIKFTSGKVEVFANVTESKIQDIKIYGDFFGIEDVAAVEDVLRGVKYEREDVLKALKTIDITRYFAGISREEIAEAV--


General information:
TITO was launched using:
RESULT:

Template: 1VQZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -124348 for 2481 contacts (-50.1/contact) +
2D Compatibility (PS) -33702 + (NN) -8253 + (LL) 1316
1D Compatibility (HY) -34400 + (ID) 6950
Total energy: -206337.0 ( -83.17 by residue)
QMean score : 0.588

(partial model without unconserved sides chains):
PDB file : Tito_1VQZ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1VQZ-query.scw
PDB file : Tito_Scwrl_1VQZ.pdb: