Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPVGIIIGTHGEAARELLKSTEMIIGKQDNVEFITFVPGENTDTLITKYKEKLDKLDTSEGVIFMVDLFGGSPYNASSQIALPEDNMDVVTGVNIPMLLETLSMRAASNQKD-LVETALTAGSGGVKSLKQSLPKIETEVGEDDL
1VRC Chain:A ((2-130))-TIAIVIGTHGWAAEQLLKTAEMLLGEQENVGWIDFVPGENAETLIEKYNAQLAKLDTTKGVLFLVDTWGGSPFNAASRIVVDKEHYEVIAGVNIPMLVETLMARDDDPSFDELVALAVETGREGVKALK---------------


General information:
TITO was launched using:
RESULT:

Template: 1VRC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -66772 for 973 contacts (-68.6/contact) +
2D Compatibility (PS) -14620 + (NN) -9723 + (LL) 1012
1D Compatibility (HY) -16000 + (ID) 3450
Total energy: -109553.0 ( -112.59 by residue)
QMean score : 0.613

(partial model without unconserved sides chains):
PDB file : Tito_1VRC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1VRC-query.scw
PDB file : Tito_Scwrl_1VRC.pdb: