Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKYRFLKFNINAGSVTLLVMFSSFFILSVILSTLLSMTWEFYAILSALVIVCFFNFKKFFPGEVAVSEEAFYYKSKAYPYSKYIIECDAKLIRFKSPSARAIPYYRIVIINKDTRAEKLIKVHNAARRYKGANTQMQVEMEELRDQLKQYQS |
1MKM Chain:A ((21-68)) | -------------------------------------------------------------PGDVSVSEIAEKFNMSVSNAYKYMVVLEEKGFVLRKKDKRYVPGYKLI-------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1MKM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -3832 for 282 contacts (-13.6/contact) +
2D Compatibility (PS) -4784 + (NN) 1154 + (LL) 10532
1D Compatibility (HY) -2800 + (ID) 650
Total energy: -380.0 ( -1.35 by residue)
QMean score : 0.164
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