Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMYEKARQMMIEAHSGQVRKITGEPYFSHPLNVARILRRAGFREEVVVAGLLHDAVEDTEMTDADIRATFGDEVADLVASHTENKTLSWEERKAHTIEQVRTGNLEEKALIVADKLDNLTSVKYALSSEGKSVWSYFKRGYDLQKWYNQGIKNNMEYGLNPSEIPPFFDEYARLVKWIFKK
4YF1 Chain:A ((28-186))--------------------TGEPYFSHPLNVARILRRAGFREEVVVAGLLHDAVEDTEMTDADIRATFGDEVADLVASHTENKTLSWEERKAHTIEQVRTGNLEEKALIVADKLDNLTSVKYALSS--KSVWSYFKRGYDLQKWYNQGIKNNMEYGLNPSEIPPFFDEYARLVKWIFK-


General information:
TITO was launched using:
RESULT:

Template: 4YF1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 31572 for 1134 contacts (27.8/contact) +
2D Compatibility (PS) -16215 + (NN) -3479 + (LL) 2288
1D Compatibility (HY) 2400 + (ID) 2150
Total energy: 14416.0 ( 12.71 by residue)
QMean score : 0.277

(partial model without unconserved sides chains):
PDB file : Tito_4YF1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4YF1-query.scw
PDB file : Tito_Scwrl_4YF1.pdb: