Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSITNLLNIKYPIIQGAMAQIAKAPLVAAVSNAGGLGIIASGGMTADMLREEIQKTKALTDKAFGVNLMLMMTNIAELTEVIIEEKVGIVTTGAGTPKTFMPIWKEAGIIVIPVVPSVMIAKRMEKMGADAVIAEGTEAGGHVGETTTMALLPQIVDAVTIPVIGAGGIADGRGIVAALALGAKGVQIGTRFLATDECPVHPDFKAAVIKASDRDTMVTGRKAGAPVRSIKNKMIKEYIRLE----EENADRDTLEELTLGSLRKAVQEGDTDNGSVMAGQIAGLITEIKPCKDVIEEMMTDAKKVIAGLELK |
2Z6J Chain:A ((5-310)) | --ITELLKIDYPIFQGGMAWVADGDLAGAVSKAGGLGIIGGGNAPKEVVKANIDKIKSLTDKPFGVNIMLLSPFVEDIVDLVIEEGVKVVTTGAGNPSKYMERFHEAGIIVIPVVPSVALAKRMEKIGADAVIAEGMEAGGHIGKLTTMTLVRQVATAISIPVIAAGGIADGEGAAAGFMLGAEAVQVGTRFVVAKESNAHPNYKEKILKARDIDTTISAQ---HAVRAIKNQLTRDFELAEKDAF---------EQMGAGALAKAVVHGDVDGGSVMAGQIAGLVSKEETAEEILKDLYYGAAKKI------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2Z6J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -219104 for 2706 contacts (-81.0/contact) +
2D Compatibility (PS) -31558 + (NN) -11280 + (LL) 1156
1D Compatibility (HY) -26400 + (ID) 7500
Total energy: -294686.0 ( -108.90 by residue)
QMean score : 0.513
|
|
|