Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VNPAYFVLLVEELKTKYLVKDICQILQVPLSTYYRWKKKDFSQSSLEKKIGQLCKAYQFTYGYRKIAALMKQEEQVGINKVQRIMQKYQWQCQVKVKKKNRPGSAYYQTENHLNRNFQASQPLEKLTTD-ITYLYFGDCRLYLSSIMDLYNGEIVAYSIGEKQDTELV--LDTLNQLSLPEGSLLHSDQGSVYTSYEYYQCCKKKNVIRSMSRKGTPADNAPIECFHSSLKCETFYHKTAYKYAKSIVIQIVKDYIKYYNEKRIQQKLGYQSPINFRKQAA |
| 3OYM Chain:A ((117-231)) | ------------------------------------------------------------------------------------------------------------------RPDRPQKPFDKFFIDYIGPLPPSQGYLYVLVVVDGMTGFTWLYPTKAPSTSATVKSLNVLTSIAIPK--VIHSDQGAAFTSSTFAEWAKERGIHLEFSTPYHPQSSGKVERKHSDIK-------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OYM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -17578 for 797 contacts (-22.1/contact) +
2D Compatibility (PS) -11851 + (NN) -5517 + (LL) 13956
1D Compatibility (HY) -4000 + (ID) 1450
Total energy: -26440.0 ( -33.17 by residue)
QMean score : 0.163
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