Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | GGIVILKRFFSYYKPYRTLFIIDFGCAVLAAILELAFPVAVNHVIDTLLPG-------KDFGLIITAALALLFFYILNTFMQYIVTYFGHMLGLNIETDMRRDLFSHLQKQPFGFYDNQKTGKLMSRMTTDLFEIGEVAHHGPEDIFISIMSLFGAFFLMLNINVKLAISTFILVPILTVLIVYFNKRMTKVTTGIFKDLGNFNAGVENAISGVRVVQAFANEPHEKGRFKVLNQAYRKSKLMFYKVMGLSFSFNYFLMRLISLFALLFGAYFTINGEISYGEFVGFILLTNVFIRPIEKINNVIESYPKGFAGFKRFLEVMDTEPAIQDEKDAKPAEAFRGDIAYNQVSFEYSDGKN-VLNHINLSIKAGETVAFVGPSGAGKTTICNLLPRFYDVSAGEITIDGENIKRFTLPSLRAQIGVVQQDVFLFSGTVRENIAYGKLDASDEEIEHVVKLAHLSKVVEEMPDGLDTIIGERGVKLSGGQKQRLAIARMFLKNPPILILDEATSALDTETEQVIQASLEELAEGRTTLIIAHRLATIKHADRIIVVNETGIAETGTHDELLAQDNGAYKRLYDAQFNTI |
2HYD Chain:A ((1-576)) | ----MIKRYLQFVKPYKYRIFATIIVGIIKFGIPMLIPLLIKYAIDGVINNHALTTDEKVHHLTIAIGIALFIFVIVRPPIEFIRQYLAQWTSNKILYDIRKKLYNHLQALSARFYANNQVGQVISRVINDVEQTKDFILTGLMNIWLDCITIIIALSIMFFLDVKLTLAALFIFPFYILTVYVFFGRLRKLTRERSQALAEVQGFLHERVQGISVVKSFAIEDNEAKNFDKKNTNFLTRALKHTRWNAYSFAAINTVTDIGPIIVIGVGAYLAISGSITVGTLAAFVGYLELLFGPLRRLVASFTTLTQSFASMDRVFQLIDEDYDIKNGVGAQPIEIKQGRIDIDHVSFQYNDNEAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTSGQILIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENILLGRPTATDEEVVEAAKMANAHDFIMNLPQGYDTEVGERGVKLSGGQKQRLSIARIFLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHIVETGTHRELIAK-QGAYEHLYSIQ---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2HYD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -363903 for 4349 contacts (-83.7/contact) +
2D Compatibility (PS) -59852 + (NN) -21705 + (LL) 284
1D Compatibility (HY) -60800 + (ID) 10850
Total energy: -516826.0 ( -118.84 by residue)
QMean score : 0.390
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