Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNQVAPFYADHVGSILRTKGIKDAREKFQSGEITALELRKIENTEIKYIVEKQKEVGLKSITDGEFRRAWWHFDFLENLDGVEGYDAAGGIQFSKVQTKSHSVKITGPIDFTTHPFIEDFIFLKEAVGDNHVAKQTIPSPAMLHYRGDIEYQPYLDDAEKFANDLATAYQKAIQAFYDAGCRYLQLDDTSWSYLCSDEQREVVRQRGFDPETLQETYKNLINEAIKHKPADMVITMHICRGNFRSTWIAEGGYGPVAETLFGKLNIDGFFLEYDNERSGDFAPLKYVTRPDLKIVLGLITSKTGELEDEAAIKARIEEASEIVPLSQLRLSPQCGFASTEEGNILTEEEQWDKLRYVVRLANDIWGE |
1YPX Chain:A ((2-367)) | -NQVAPFYADHVGSILRTKGIKDAREKFQSGEITALELRKIENTEIKYIVEKQKEVGLKSITDGEFRR--WHFDFLENLDGVEGY----------------SVKITGPIDFTTHPFIEDFIFLKEAVGDNHVAKQTIPSPAMLHYRGDIEYQPYLDDAEKFANDLATAYQKAIQAFYDAGCRYLQLDDTSWSYLCSDE--------GFDPETLQETYKNLINEAIKHKPADMVITMHICRG----------GYGPVAETLFGKLNIDGFFLEYDNER---FAPLKYVTRPDLKIVLGLITSKTGE-EDEAAIKARIEEASEIVPLSQLRLSPQCGFA--------TEEEQWDKLRYVVRLANDIWGE |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YPX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -165264 for 2632 contacts (-62.8/contact) +
2D Compatibility (PS) -34632 + (NN) -17997 + (LL) 3212
1D Compatibility (HY) -44000 + (ID) 15900
Total energy: -274581.0 ( -104.32 by residue)
QMean score : 0.505
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