Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VNKFMELLGEKLMPLAAKLGENRYLTTLRDAFMLAFPLTMFGSIAVVLMNLPF--WSDETKAVL----QLYLGNAQSATMSIMTVFVVFGIGYSLSKYYKVEAIYGGAVALASFLILTPFFF-----NSPDGELITGALSLDRLGAKGMFIGMITGFIAAELYRFFVQRDWTIKMPAGVPPAVAKSFAALIPAILTLSIFLAINVMVQFFFHTNLHDVVYTVIQKPLVGLGSGIVPTLIALFFVQVLWFFGLHGQIIVNSVMDPIWNTLMLENLDAYKAGLPLPHIITKPFMEVFTVGMGGSGMTLAVVIALAFLMKSKQSKEIGRLALGPGIFNVNEPVLFGMPIVLNATILIPWIIAPLIVTTLNYFVMAAGIVPAPTGVAVPWTVPIVINGILATNSWLGGA-LQVVDFFIVLIIWYPFLKLVDRTNIARESEAAIK |
| 3QNQ Chain:A ((3-427)) | -----RFLEKYVMPVAGKVAEQRHLLAIRDGLVLTMPFLIIGSIFLIISTLPIPGYSEFMASLFGKNWNVALGYPVSATFNIMALIAVFGIAYRLGEYYKVDALASGALSLVTFLLATPFQVAYIMPGTKESILVDGVIPAALMGSQGLFVAMIIAIISTEIYRFLVQKKMIIKMPETVPPAVTRSFAALIPGFIVVTVVWIIRLIFEHTTFGSIHNVVGKLLQEPLSILGASLWGAVIAVILVHVLWACGIHGATIVGGVMSPIWLSLMDQNRIAFQAGQDVPNTITAQFFDLW-IYMGGSGATLALVVGMLLFARSQQLKSLGRLSIAPGIFNINEMVTFGMPIVMNPLLLIPFIVVPVVLTIVSYFAMEWGLVARPSGAAVTWTTPILFSGYLGSGGKISGVILQLVNFALAFVIYLPFLKIWDKQKI--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QNQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -384698 for 3537 contacts (-108.8/contact) +
2D Compatibility (PS) -42607 + (NN) -8569 + (LL) 1548
1D Compatibility (HY) -58800 + (ID) 8600
Total energy: -501726.0 ( -141.85 by residue)
QMean score : 0.364
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