Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTFWQDMMNFFSYDNLMYWLSEYRNLGPLLAFLLPFIEAFLPFLPFIVFVVVNVNAYGLLIGFLISVIAAIAGSLCVFLLARKFGQTRFLRFISGHKQIKRVMEWIDRHGFSPIFILLVMPFTPSSAVNIVAGLSKIKVYQFILALVGGKLIKVFAISYIGYDFVDLIHQPLKLAILAVSVVILWFVGKRLEHWMSGKNLK |
| 3CDK Chain:B ((130-181)) | -----------------------------------------------------------------------------------------MDLVNGAKRIVVIMEHVNKHGESKVKKTCSLPLTGQKVVHRL--ITDLAVFDFV---------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CDK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -20359 for 249 contacts (-81.8/contact) +
2D Compatibility (PS) -5363 + (NN) 405 + (LL) 13788
1D Compatibility (HY) -4800 + (ID) 650
Total energy: -16979.0 ( -68.19 by residue)
QMean score : 0.068
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