Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKEVMIKATGLEKSFKKTEVLKGVDFEVKHGEIFALLGSNGAGKTTTIQILATLLKADNGNAHISGFDVKTEPEKVRKHISLTGQFAAVDGLLTGRENILLIAKLRGE--KNPAQTADDLLARFGLEKAADRRADTYSGGMTRRLDIAMSLVGSPDVIFLDEPTTGLDPEGRMEVWKTI-KTLSDGGTTILLTTQYLDEAEQLADRIAILHGGTIIANGTLDELKKLFPPAEVEYIEKQPSLEEIFLAIINGKEEVK |
| 4YER Chain:A ((3-254)) | --EDIIVVENLVKKFGDFEAVKGVSFSVKKGEIFAFLGPNGAGKTTTIHMLTTLLKPTSGKAWVAGHDVLKEPREVRRKIGIVFQDQSLDRELTAYENMYIHGKIYGYGGEKLKKRILELLEFVELLEFKDKPVKTFSGGMARRLEIARSLIHEPEVLFLDEPTIGLDPHTRAHMWEYISKMKKEHNMTIFLTTHYMDEAEQLADRVAIIDHGKIIALGTPTELKR------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4YER.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 19897 for 1691 contacts (11.8/contact) +
2D Compatibility (PS) -22003 + (NN) 9828 + (LL) 2984
1D Compatibility (HY) 4000 + (ID) 2200
Total energy: 12506.0 ( 7.40 by residue)
QMean score : 0.174
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