Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LVIYLLAGFFLLLFIVLSFIDRRRISNGIILTMALFFSVLSVVYATFSKGNELLVSVMGTVLLLLVLLIPFFVVGIATMLIVNGRLMLKREGRKLANMLPLIIGLGILALIITWFGSILKTGSPILGIVVVFIVALVGYFSFLFLSFLLSTFLYQFNFPRYNQDFLIVLGSGLIGGDRVPPLLASRLNRAIKFYDKQYAKKGKRATFIVSGGQGANETISEAEAMRGYLIEQGIDENFIIMEDQSVNTLQNMKFSKAKMDAIMSNYNSLFSTNNFHLFRAGIYARKAGLKSQGIGAKTALYYMPNALIREFIAITVMYKKVHMVLLGLLLLFFAFLAIIGVTFR |
2DFS Chain:A ((116-267)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------LPIYGED-IINAYSGQNMGDMDPHIFAV----AEEAY-KQMARDERNQSIIVSGESGAGKTVSAKYAMRYFATVSG--------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2DFS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -6817 for 395 contacts (-17.3/contact) +
2D Compatibility (PS) -8089 + (NN) -7760 + (LL) 26408
1D Compatibility (HY) -2000 + (ID) 1350
Total energy: 392.0 ( 0.99 by residue)
QMean score : 0.225
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