Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKWMVIISIISLVALLGACGNNDNEKDQEDKSTTDSTTKKAKSSSNESNKAAETKENDTNDKAATTDKGSSNPTKEEKDTSTTTDTPKKETPKSPAKTEAFSFSPSGFKVSTVESILGGDVTTTYLSSSKSFQKDFEALTLFINQYKVEHVINPTKEVSASNPESYLANKNGYVITLDISIKNNSKKDKMYKADQISLLGASKSVGGSLDNFIPSGFHLIGSSSDPYNFTAGKTARGLLTFTMDEATYNDLAKDSQIGVPDPSRFDSSSTKGSSQDNVVAPFPIK |
| 4EAE Chain:A ((4-190)) | ---------------------------------------------------------------------------------------------------EAFSFSPSGFKVSTVESILGGDVTTTYLSSSKSFQKDFEALTLFINQYKVEHVINPTKEVSASNPESYLANKNGYVITLDISIKNNSKKDKMYKADQISLLGASKSVGGSLDNFIPSGFHLIGSSSDPYNFTAGKTARGLLTFTMDEATYNDLAKDSQIGVPDPSRFDSS---GSSQDNVVAPFPIK |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EAE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -67354 for 1437 contacts (-46.9/contact) +
2D Compatibility (PS) -19958 + (NN) -6593 + (LL) 3732
1D Compatibility (HY) -22400 + (ID) 9200
Total energy: -121773.0 ( -84.74 by residue)
QMean score : 0.488
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