Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LNNKTSWIEELKEKRMAYGLSQNKLAVASGITRQYLSDIE----NEKVIPTEQVKTALLDSLERFNPDNPLEMLFDYVRIRFPTDNVEKIIEEILHLNIDYMIHEDFGYYSYPEHYRFGDIMVMVSYDITKGVLLELKGKGCRQYENFLLAQHRSWYDFFTDCLEVNGVFKRLDLAINDKVGILDIPELARKSEQEECISIFRTFKNYRSGELVHRDEKSDMGNTLYIGSLKSEVYFCIYEKDYEQFIKNDIPLEDPEVKNRFEIRLKNDRATHAIQDLLAYRNAEKTAFEIINRYIRFADKDTTKRRSQWQTSERWEWFIGKNRGELRLTTKPEPYSYERTLNWLRHQVAPTLKVASILDVLNETDIIPAMIRDANLTEKHEKLIEQQNLAVEDVIV |
1Y7Y Chain:A ((16-65)) | --------QRLRELRTAKGLSQETLAFLSGLDRSYVGGVERGQRNVSLVNILKLATAL---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Y7Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -1453 for 298 contacts (-4.9/contact) +
2D Compatibility (PS) -5113 + (NN) -916 + (LL) 25956
1D Compatibility (HY) -4000 + (ID) 950
Total energy: 13524.0 ( 45.38 by residue)
QMean score : 0.667
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