Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VEREELKAIIKQIVADKLSGAETEIPIGVSNRHIHLTETDYNQLFPNEPIQVKKWLKQPGEFAAEQTLTVVSEKGELHRVRILGPLRKFSQVELSKTDARMLGMKIPIRVSGDIEGTPGIKLVSKHSEICLPKGAIVAKRHIHLPESVANEFGVKQGDEVSVLVGSEMRSLVLNHCTIRVNNQFIPEMHIDTDEANAADIAGTNFAKIIKS |
| 1VJT Chain:A ((326-367)) | -----------------------------------------------------------------------------------------------------------IKLAEEVQQNPGMKLTEEHPEI-FPKGKLSGEQHIPFINAIAN------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VJT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -3667 for 173 contacts (-21.2/contact) +
2D Compatibility (PS) -4026 + (NN) 2920 + (LL) 12704
1D Compatibility (HY) -3600 + (ID) 750
Total energy: 3581.0 ( 20.70 by residue)
QMean score : 0.008
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