Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LVIMVYESGVSEMTENEQNKHEEKALVPSFGLDLLRDYLIPELLGDEAPHIMYWAGKDLARKFPLDSLEEVAEFFEEASWGNFSILKEKKDEMRLLLEGETVAARFRTQEEPTFKLEAGFIAEQLQSQKKLYTESYDEIDKRKKQVTIIVKWDRKETIDNEERY |
| 3NJC Chain:A ((5-145)) | -----FEASIDNLKEIEMN---------AYAYELIREIVLPDMLGQDYSSMMYWAGKHLARKFPLESWEEFPAFFEEAGWGTLTNVSAKKQELEFELEGPIISNRLKHQKEPCFQLEAGFIAEQIQLMNDQIAESYEQVKKRADKVVLTVKWDMK--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NJC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 64157 for 875 contacts (73.3/contact) +
2D Compatibility (PS) -13144 + (NN) 3736 + (LL) 2584
1D Compatibility (HY) 6800 + (ID) 500
Total energy: 63633.0 ( 72.72 by residue)
QMean score : -0.099
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