Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRNKKIPLRKCIITGERLPKGELLRIAYSKDGALTIDPTGKAPGRGFYI-VKSVEACEKAKKKNAIFHQLKMPEQESFYDELIAYVKSLEEPTNG
1G2R Chain:A ((7-88))
---RKIPLRKSVVSNEVIDKRDLLRIVKNKEGQVFIDPTGKANGRGAYIKLDNAEALE-AKKKKVFNRSFSMEVEESFYDELIAYV---------
General information:
TITO was launched using:
RESULT:
Template:
1G2R.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48194 for 540 contacts (-89.2/contact) +
2D Compatibility (PS) -8605 + (NN) -5876 + (LL) 372
1D Compatibility (HY) -7200 + (ID) 2250
Total energy: -71753.0 ( -132.88 by residue)
QMean score : 0.664
(partial model without unconserved sides chains):
PDB file :
Tito_1G2R.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1G2R-query.scw
PDB file :
Tito_Scwrl_1G2R.pdb
: