Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKSNTFLLITILVGLVFISFGCSEEKETPKKTAKEVQGVQIKTKEFQRVVGWLSKDSVLLQTKKSGVTYFEELNIYNEKKRPIFNTKESISEVQISPDYRNILLYSAESAEKATMRIIALNDGSTVASRATKPLTTTFYWNDESPEKIMFVTYSPEWNFQIENWDYTLDQLDKIDVASPFISWYGDNLVISNNKDKPDDELGNLYLQDIRDSATKNLIVANIMQFAVHDNVLLTIEKNSDEKLLYDFRTLGFQNFFSYNAAREYDELGTFVPYFDTNFDKNTFLTFVPYKSAKIGSGAKEYKLVKIDPTNKKESTILELMDNQPILSYETGDLVLYGYLFDKVIDTKTGKMYNLINTPTKSF
4NLM Chain:A ((35-363))----------------------------------KEVQGVQIKTKEFQRVVGWLSKDSVLLQTKKSGVTYFEELNIYNEKKRPIFNTKESISEVQISPDYRNILLYSAESAEKATMRIIALNDGSTVASRATKPLTTTFYWNDESPEKIMFVTYSPEWNFQIENWDYTLDQLDKIDVASPFISWYGDNLVISNNKDKPDDELGNLYLQDIRDSATKNLIVANIMQFAVHDNVLLTIEKNSDEKLLYDFRT-GFQNFFSYNAAREYDELGTFVPYFDTNFDKNTFLTFVPYKSAKIG--AKEYKLVKIDPTNKKESTILELMDNQPILSYETGDLVLYGYLFDKVIDTKTGKMYNLINTPTKSF


General information:
TITO was launched using:
RESULT:

Template: 4NLM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -159870 for 2500 contacts (-63.9/contact) +
2D Compatibility (PS) -35064 + (NN) -9687 + (LL) 2672
1D Compatibility (HY) -47600 + (ID) 16300
Total energy: -265849.0 ( -106.34 by residue)
QMean score : 0.483

(partial model without unconserved sides chains):
PDB file : Tito_4NLM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4NLM-query.scw
PDB file : Tito_Scwrl_4NLM.pdb: