Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LTVSKDEIMKKATELRDALQQTEEVSFYRLAEERINANSKVAAKVSKIKLLQKEAVNLEHYQKLEAMKQTENQIDNVRADIDSLPIVTEFRRAQEDANDLLQSITTEITTKVTTELEKEN
2PIH Chain:A ((5-117))
---SKKDIVQQARNLAKMISETEEVDFFKRAEAQINENDKVSTIVNQIKALQKQAVNLKHYEKHEALKQVEAKIDALQEELEEIPVIQEFRDSQMEVNDLLQLVAHTISNQVTNEI----
General information:
TITO was launched using:
RESULT:
Template:
2PIH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 41059 for 623 contacts (65.9/contact) +
2D Compatibility (PS) -12133 + (NN) -5602 + (LL) 868
1D Compatibility (HY) 6800 + (ID) 600
Total energy: 30392.0 ( 48.78 by residue)
QMean score : 0.300
(partial model without unconserved sides chains):
PDB file :
Tito_2PIH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2PIH-query.scw
PDB file :
Tito_Scwrl_2PIH.pdb
: