Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAKHIVELTDALSNKIAAGEVVERPASVVKELVENAIDAGSTVIDILVEEAGLNKITIIDNGSGIEEEDVATAFLRHATSKIKNEADLFRVHTLGFRGEALPSIASVSHLAMETSTGETKGTSISLEGGKIIEQKSGHARKGTQIEVSQLFFNTPARLKYLKSLPTELGNITDILNRLALAHPDISFRFSHNGKPLLQTNGNGDLRQVIAAIYGISIAKKSIPVKAESLDFKISGYAVLPEVNRSNRNYISTIINGRFIKNFALVKAIQEGYHTLLPIGRFPIIVLQIEMDPIIVDVNVHPAKLEVRLSKEKELGQLISQMIKEAFHKLQLIPEGEISKKQKEVQKSEQIQMSFEENKPAKEIPTLFSKPTIPEYVPSDEDAPREDDFILETMPPYEPQAEQEEHSKERIPKMYPIGQMHATYIFAQNENGLYIIDQHAAQERIKYEFYREKIGEVSRELQELLVPIVLEFPADEYVRLEEQKAKLEEVGVFLENFGQNSFIIRAHPTWFPKDQEEEMLREIIDEALSAPSISIHKLREDTAIMMSCKKSIKANHYLTTQDMEALLDTLREASDPFTCPHGRPVIIQYSTYELEKMFKRVM |
| 3GAB Chain:A ((435-624)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RVPIMYPIGQMHGTYILAQNENGLYIIDQHAAQERIKYEYFREKVGE--PEVQEMIVPLTFHYSTNEALIIEQHKQELESVGVFLESFGSNSYIVRCHPAWFPKGEEAELIEEIIQQVLDSKNIDIKKLREEAAIMMSCK-----NRHLRNDEIKALLDDLRSTSDPFTCPHGRPIIIHHSTYEMEKMFK--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GAB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -90446 for 1306 contacts (-69.3/contact) +
2D Compatibility (PS) -20944 + (NN) -13893 + (LL) 29820
1D Compatibility (HY) -23600 + (ID) 5850
Total energy: -124913.0 ( -95.65 by residue)
QMean score : 0.573
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