Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LNERIFRENTRPVQVGNLTIGGSEELTIQSMTTTKTHDVEATVAEIHRLEEAGCQIVRVACPDERAANALSAIKKKIHIPLVADIHFDYRLALKAIDAGVDKIRINPGNIGRRDRVEKVVNAAKAKNIPIRIGVNAGSLEKKIIQKYGYPTADGMVESALAHIKILEDLDFYDIIVSLKASDVNLAIEAYDKASRAFNYPLHLGITESGTQFAGGIKSAAGLGAILSLGIGNTLRVSLSADPVEEIKVAREVLKSFGLSSNAAMLISCPTCGRIEIDLIRIANEVENYIAKIEVPIKVAVLGCAVNGPGEAREADIGIAGSNGEGLLFRHGKIIRKVPEAIMIDELKKEIDILAEEFFVKKIDLESLR |
4MWA Chain:D ((5-263)) | -NEMTHRTKTRPVKVGNLTIGGNNELIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVAVPDERAANAIADIKKQINIPLVADIHFDYRLALKAIEGGIDKVRIN--------KVEAVVNAAKERGIPIRIGVNAGSLERHILEKYGYPTADGMVESALHHIKILEDLDFHDIIVSMKASDVNLAIEAYEKAARAFDYPLHLGITESGTLFAGTVKSAAGLGAILNKGIGNTLRISLSADPVEEVKVARELLKSFGLAS------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MWA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -126758 for 2184 contacts (-58.0/contact) +
2D Compatibility (PS) -27917 + (NN) -15991 + (LL) 8580
1D Compatibility (HY) -30400 + (ID) 10300
Total energy: -202786.0 ( -92.85 by residue)
QMean score : 0.616
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