Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTVLEIDLLDETKNLLDEDKQLVENILQFAAEYLKIEQGTELSLTFTTNEGIREINREYRDKDQATDVISFALEEMGDGETEIDWGEFDLETPRMLGDIIISTEKAEEQAKDYGHTKARELGFLAVHGLLHLLGYDHMEPDEEKVMFGLQKEVLDAYGLER
1OZ9 Chain:A ((41-135))
---------------------------------------VELSVYITDDQEIRELNKTYRKKDKPTDVLSFPMGE--------EFGGY-----KILGDVVISQDTAERQARELGHSLEEEVKRLIVHGIVHLLGYDHEKGGEEEKKF--------------
General information:
TITO was launched using:
RESULT:
Template:
1OZ9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -16660 for 616 contacts (-27.0/contact) +
2D Compatibility (PS) -10369 + (NN) -6571 + (LL) 5164
1D Compatibility (HY) -9200 + (ID) 2250
Total energy: -39886.0 ( -64.75 by residue)
QMean score : 0.625
(partial model without unconserved sides chains):
PDB file :
Tito_1OZ9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1OZ9-query.scw
PDB file :
Tito_Scwrl_1OZ9.pdb
: