Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MERNEVLKKVEAAMPNARFKHTLGVEKAAVELAEHYHMDVEKARITALLHDYAKYYDDDKARKIIEDEGYDPRLLSFHHSLWHAPVGAYLAEKEFGITDTEILEAIRLHTTGSATMSDFDKLIYLADYTEQGRTFPGVYKARRLALKSLDEAMLFALSNTITHLVKKQQLVFPDTLDAYNYFVNLNLEGDY
2OGI Chain:A ((10-192))
LDRTELLSKVRHMMSDKRFNHVLGVERAAIELAERYGYDKEKAGLAALLHDYAKELSDDEFLRLIDKYQPDPDLKKWGNNIWHGLVGIYKIQEDLAIKDQDILAAIAKHTVGSAQMSTLDKIVYVADYIEHNRDFPGVEEARELAKVDLNKAVAYETARTVAFLASKAQPIYPKTIETYNAYI--------
General information:
TITO was launched using:
RESULT:
Template:
2OGI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -86424 for 1462 contacts (-59.1/contact) +
2D Compatibility (PS) -19838 + (NN) -12101 + (LL) 140
1D Compatibility (HY) -15200 + (ID) 4100
Total energy: -137523.0 ( -94.06 by residue)
QMean score : 0.694
(partial model without unconserved sides chains):
PDB file :
Tito_2OGI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OGI-query.scw
PDB file :
Tito_Scwrl_2OGI.pdb
: