Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MADKRQSNNRRIKQNLVEGSRSQQNTKRKKTNLVLNVLIIVVSLLIIGSLYFVLFKTESDPAQQENKTASSTAKKEDAAKSSEKKKDSSDDKTTETTESDDPNVAKVITKDWKPIGTEQTGDHVNSYSSTSVDWQEKRKAFSVATDIPVSNTSLWFVEQGADPATQAIGTLSTKENPDK-----AYRVYITW----VDGEGWQPTKVEELKTNDKR |
4H9T Chain:A ((197-252)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------YLLEHGADPKKIVIGHMCGNTDPDYHRKTLAYGVYIAFDRFGIQGMVGAPTDEERVRT---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4H9T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -314 for 218 contacts (-1.4/contact) +
2D Compatibility (PS) -4728 + (NN) 260 + (LL) 8892
1D Compatibility (HY) 2400 + (ID) 50
Total energy: 6460.0 ( 29.63 by residue)
QMean score : -0.043
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