Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKENKVQWQVIAGIILALIIAIFAVINVDPVEVNFLFAQAEWPLILIILGSVLCGCLIIFFLNIAKSRGMKKKVKQLTTEKAELERQLAAAKAMKTHSSKVEKRDTENAVDTTK
4LTB Chain:A ((48-88))
-----------------------------------------------------------------------RKVEQLQQEYTEMKALLDASETTSTRKIKEEEKRVNSKFDT--
General information:
TITO was launched using:
RESULT:
Template:
4LTB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 12335 for 155 contacts (79.6/contact) +
2D Compatibility (PS) -4714 + (NN) -3704 + (LL) 7812
1D Compatibility (HY) -1200 + (ID) 650
Total energy: 9879.0 ( 63.74 by residue)
QMean score : 0.784
(partial model without unconserved sides chains):
PDB file :
Tito_4LTB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4LTB-query.scw
PDB file :
Tito_Scwrl_4LTB.pdb
: