Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPQFFLNKRLIILLISIIVLVALVGFSLRDRENASWPEQFVKDVVGFGENIVAKPTSFISGAVDGVVDLKNTYTENQHLKERLEELAQLESEVADLKKENKDLKESLDITDSIRDYDPLNASVISRNPTNWNDQVEIDKGSSDGVKPDMAVTTPSGLIGKVTTTGAKSATVELLTSSDVKNRVSAKVQGKENAFGIINGYDSDTKLLELKQLPYDMKFKKGQKVVTSGLGGKFPAGIFIGTIEKVETDKMGLSQTAFIKPGADMYDLNHVTVLKRSAEAGTTDDDTTSSDTTGGQ |
2J5U Chain:A ((74-284)) | -------------------------------------------------------------------------TENQHLKERLEELAQLESEVADLKKENKDLKESLDITDSIRDYDPLNASVISRNPTNWNDQVEIDKGSSDGVKPDMAVTTPSGLIGKVTTTGAKSATVELLTSSDVKNRVSAKVQGKENAFGIINGYDSDTKLLELKQLPYDMKFKKGQKVVTSGLGGKFPAGIFIGTIEKVETDKMGLSQTAFIKPGADMYDLNHVTVLKRSAEAGTTDD----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2J5U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 35928 for 1737 contacts (20.7/contact) +
2D Compatibility (PS) -23178 + (NN) -12465 + (LL) 5524
1D Compatibility (HY) -23600 + (ID) 10500
Total energy: -28291.0 ( -16.29 by residue)
QMean score : 0.602
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