Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTQVTFKHNPVTLVGTERKVGDKAPNFTVVNRDLEEVTLHDYDGKVRLISVVPSIDTSVCSTQTRKFNEEASNLDNTVVLTISVDLPFAQKKWCAAEGLPNAITLSDHRDLSFGEAYGVIMKELRLLARSVFVVNAVGEIVYTEVVPEGSDHPNYEAAIEAAKKA
2JSY Chain:A ((1-163))
MAEITFKGGPVTLVGQEVKVGDQAPDFTVLTNSLEEKSLADMKGKVTIISVIPSIDTGVCDAQTRRFNEEAAKLGDVNVYTISADLPFAQARWCGANGIDKVETLSDHRDMSFGEAFGVYIKELRLLARSVFVLDENGKVVYAEYVSEATNHPNYEKPIEAAK--
General information:
TITO was launched using:
RESULT:
Template:
2JSY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -92441 for 1389 contacts (-66.6/contact) +
2D Compatibility (PS) -18165 + (NN) -7224 + (LL) 208
1D Compatibility (HY) -18800 + (ID) 5150
Total energy: -141572.0 ( -101.92 by residue)
QMean score : 0.519
(partial model without unconserved sides chains):
PDB file :
Tito_2JSY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JSY-query.scw
PDB file :
Tito_Scwrl_2JSY.pdb
: