Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMELIKGNIASPKGFYADGKHAGLKRK-RNDIGWIYSEVPANAAAVYTMNQMQAAPIFVTKDSFQSNAKLQAIIVNSGNANACTGNQGMLDALAMRAQTAEKLEIPLDSVAVASTGIIGDMLPMDKINAGIEMLEKQTGNAADFEEA---ILTTDTFQKQISFQTEIGGRKVTMSGVAKGSGMIHPNMATMLAFITTDAAI-PAELLQKLLKIKVDKTFNQITVDGDTSTNDMVVVMANGCAENPMLQEGTADFAKFADMFQAVTEHLAKSIARDGEGATKLIEVQVNGATKTEDARMIAKKIVSSSLVKTAAFGGDGNWGRIICAIGYSGGRFAPD--NITIKIGGIEILNHSSQTIYNQQALDA----YLEEEHIIIEVDLHIGLESGTAWGCDLSYEYVKINACYRT
1VZ6 Chain:A ((8-390))---------TPRGFVVHTAPVGLADDGRDDFTVLASTAPATVSAVFTRSRFAGPSVVLCREAV-ADGQARGVVVLARNANVATGLEGEENAREVREAVARALGLPEGEMLIASTGVIGRQYPMESIREHLKTLEWPAGEGG-FDRAARAIMTTDTRPKEV--RVSVGG--ATLVGIAKGVGMLEPDMATLLTFFATDARLDPAEQ-DRLFRRVMDRTFNAVSIDTDTSTSDTAVLFANGLA-------GEVDAGEFEEALHTAALALVKDIASDGEGAAKLIEVQVTGARDDAQAKRVGKTVVNSPLVKTAVHGCDPNWGRVAMAIGKCSDDTDIDQERVTIRFGEVEVYPP-------DDALRAAVAEHLRGDEVVIGIDLAIADGAFTVYGCDLTEGYVRLNSE---


General information:
TITO was launched using:
RESULT:

Template: 1VZ6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -175535 for 3270 contacts (-53.7/contact) +
2D Compatibility (PS) -40393 + (NN) -20172 + (LL) 2408
1D Compatibility (HY) -24400 + (ID) 7100
Total energy: -265192.0 ( -81.10 by residue)
QMean score : 0.424

(partial model without unconserved sides chains):
PDB file : Tito_1VZ6.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1VZ6-query.scw
PDB file : Tito_Scwrl_1VZ6.pdb: