Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MILLIDNYDSFTFNLEQYLAEF-SEVVVKRNDAADLIKIAAL-ADGIVLSPGPGKPS---DAGLLEEVVAKFAKEKPLLGICLGHQAIGEVFGGEVKRAAKIRHGKVSTM---RQTAGAIFANLPEEMPVMRYHSLIVDKNTLPDVLEVLAIATDDSEVMAMKVKDYPVYGLQFHPESIGTNDGKQMMENFIHIVEGARENGNLTTKSI
1QDL Chain:B ((3-195))
LTLIIDNYDSFVYNIAQIVGELGSYPIVIRNDEISIKGIERIDPDRLIISPGPGTPEKREDIGVSLDVIKYLGKRTPILGVCLGHQAIGYAFGAKIRRARKVFHGKISNIILVNNSPLSLYYGIAKEFKATRYHSLVVDEVHRPLIVD--AISAEDNEIMAIHHEEYPIYGVQFHPESVGTSLGYKILYNFLNRV--------------
General information:
TITO was launched using:
RESULT:
Template:
1QDL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -107027 for 1653 contacts (-64.7/contact) +
2D Compatibility (PS) -19780 + (NN) -4483 + (LL) 836
1D Compatibility (HY) -19600 + (ID) 3950
Total energy: -154004.0 ( -93.17 by residue)
QMean score : 0.490
(partial model without unconserved sides chains):
PDB file :
Tito_1QDL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1QDL-query.scw
PDB file :
Tito_Scwrl_1QDL.pdb
: