Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MITLKSRREIDEMKAAGKILADTHKELKKIIKPGITSWDLEVFTEEFLRKNGATPEQKGFEGYEYAICASINDEICHGFPRKQKLNQGDIITVDMVVNYHGALADSAWTYAVGEVPDDVKHLMDVTHKALYLGIEQAQVGARVGDIGHAIQTYVESENLAVVREFIGHGVGPTLHEKPDIPHYGTAGKGPRLKEGMVITVEPMVNMGAWKAKMDDNGWTARTVDGSLSAQYEHTFAITKDGPEILTYQGEND
3TB5 Chain:A ((1-250))
MITLKSPREIEMMDESGELLADVHRHLRTFIKPGITSWDIEVFVRDFIESHGGVAAQIGYEGYKYATCCSINDEICHGFPRKKVLKDGDLIKVDMCVDLKGAISDSCWSYVVGESTPEIDRLMEVTKKALYLGIEQAQVGNRIGDIGHAIQTYVEGEGYGVVRDFVGHGIGPTIHESPMIPHYGEAGKGLRLKEGMVITIEPMVNTGTWRMKMDPNGWTAYTEDGGLSCQYEHSLAITKEGPRILTSQGE--
General information:
TITO was launched using:
RESULT:
Template:
3TB5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -129902 for 2206 contacts (-58.9/contact) +
2D Compatibility (PS) -26577 + (NN) -10867 + (LL) -156
1D Compatibility (HY) -28400 + (ID) 8300
Total energy: -204202.0 ( -92.57 by residue)
QMean score : 0.587
(partial model without unconserved sides chains):
PDB file :
Tito_3TB5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TB5-query.scw
PDB file :
Tito_Scwrl_3TB5.pdb
: