Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIENELEHAKKTEKIEFGVNRRLIFSSCLLWMAVGLLLYVVFSHIKGVNGIEEMILLVFIGLCVLRPLFRLINIAPTVELTERGVAYRGDFKSWNEIKKTELKKPAMMLFSQGRLIIMTSINGREEVAWDIVAADVSISLEELEKLIQSMRSTYTDDETIGMEIFVEKK |
3NOW Chain:A ((845-904)) | --------------------------------------------------------------------------------------------SWLDILHTLIANPSPAVQHRGIVIILNMINAGEEIAKKLFETDIMELLSGLGQLPDDTRA----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NOW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -6085 for 317 contacts (-19.2/contact) +
2D Compatibility (PS) -6469 + (NN) -2580 + (LL) 9912
1D Compatibility (HY) -3600 + (ID) 900
Total energy: -9722.0 ( -30.67 by residue)
QMean score : 0.163
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