Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LSNISKETVEKVANLAKLEVSETEATAFAGQLGKIIELVEQLNTLDTTNVEPTSHAIDVSNVLREDVATKGLDRKEVLKNAPDEQDGMFKVPTIMEQ
2DF4 Chain:C ((2-95))
-TKVTREEVEHIANLARLQISPEETEEMANTLESILDFAKQNDSADTEGVEPTYHVLDLQNVLREDKAIKGIPQELALKNAKETEDGQFKVPTIM--
General information:
TITO was launched using:
RESULT:
Template:
2DF4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8420 for 392 contacts (-21.5/contact) +
2D Compatibility (PS) -9954 + (NN) -1326 + (LL) 400
1D Compatibility (HY) -6400 + (ID) 2200
Total energy: -27900.0 ( -71.17 by residue)
QMean score : 0.614
(partial model without unconserved sides chains):
PDB file :
Tito_2DF4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DF4-query.scw
PDB file :
Tito_Scwrl_2DF4.pdb
: