Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPAVIGVIMGSTSDWDTMKKACDVLDELEIAYEKKVVSAHRTPDLMFQYAEQARERGLKIIIAGAGGAAHLPGMVAAKTTLPVIGVPIKSKALNGMDSLLSIVQMPGGVPVATVAIGESGAVNAGLLAAQILSITDDAITNRLQKRRATLEETVLESSDYLG
1XMP Chain:A ((2-156))
-KSLVGVIMGSTSDWETMKYACDILDELNIPYEKKVVSAHRTPDYMFEYAETARERGLKVIIAGAGGAAHLPGMVAAKTNLPVIGVPVQSKALNGLDSLLSIVQMPGGVPVATVAIGKAGSTNAGLLAAQILGSFHDDIHDALELRREAIEKDVRE------
General information:
TITO was launched using:
RESULT:
Template:
1XMP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -126609 for 1304 contacts (-97.1/contact) +
2D Compatibility (PS) -16669 + (NN) -5265 + (LL) 172
1D Compatibility (HY) -18800 + (ID) 5900
Total energy: -173071.0 ( -132.72 by residue)
QMean score : 0.680
(partial model without unconserved sides chains):
PDB file :
Tito_1XMP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XMP-query.scw
PDB file :
Tito_Scwrl_1XMP.pdb
: