Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKQEEIIIAAQKWMQSHFEKETTGHDWEHIKRVWHLSKQIQVTEGGDKFAIELAALFHDYNDSKLTEDPLQATEIITTWLREKEIPEDVISKIIRIIQAVSFKNGKNPIQASTIEEKIVQDADRLDAIGAIGIARTFTYGGAHNREIANRDHPENTTLQHFYDKLLLIQTQLKTKTGRELAGEKQIIMQDFIHALEKELKI
3B57 Chain:A ((3-201))
--KEEIILSAKNWMHSHF------HDWSHIKRVWKLSKEIQSKEGGDLFTIELAALFHDYSD-------QEATKTLINWMETKEIPSELIKKIIRIIQSVS---------ALTIEEKIVQDADRLDAIGAIGIARTFTYGGAHNREIANQN-PKNTTLQHFYDKLLLIKDQLNTETAKTIAKEKQKIMQDFIQALEKELKV
General information:
TITO was launched using:
RESULT:
Template:
3B57.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -67607 for 1331 contacts (-50.8/contact) +
2D Compatibility (PS) -19411 + (NN) -9108 + (LL) 784
1D Compatibility (HY) -20400 + (ID) 6550
Total energy: -122292.0 ( -91.88 by residue)
QMean score : 0.521
(partial model without unconserved sides chains):
PDB file :
Tito_3B57.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3B57-query.scw
PDB file :
Tito_Scwrl_3B57.pdb
: