Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ISKDMLVNDGIRAREVRLIDQDGEQLGVKSKIDALQIAEKANLDLVLVAPTAKPPVARIMDYGKFRFEQQKKDKEARKNQKVIVMKEVRLSPTIDEHDFDTKLRNARKFLEKGDKVKCSIRFKGRAITHKEIGQKVLDRFAKACEDLCTIEQRPKMDGRSMFLVLAPLHEK
1TIG Chain:A ((83-167))
----------------------------------------------------------------------------------INVKEVRLSPTIEEHDFNTKLRNARKFLEKGDKVKATIRFKGRAITHKEIGQRVLDRLSEACADIAVVETAPKMDGRNMFLVLAP----
General information:
TITO was launched using:
RESULT:
Template:
1TIG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42570 for 582 contacts (-73.1/contact) +
2D Compatibility (PS) -9314 + (NN) -4232 + (LL) 6696
1D Compatibility (HY) -9200 + (ID) 3350
Total energy: -61970.0 ( -106.48 by residue)
QMean score : 0.681
(partial model without unconserved sides chains):
PDB file :
Tito_1TIG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1TIG-query.scw
PDB file :
Tito_Scwrl_1TIG.pdb
: